Fieldwork with Wildlife Trust

As part of the summer internship at Edge Hill University, I’ve recently gotten out to do some sampling! Related to the topic of the internship, “Does meadow restoration conserve genetic variation”, this sampling trip was a test run for a larger project. Myself and a recent Edge Hill graduate, Heather Wickson, took a trip over to Wigan and met the Lancashire Wildlife Trust at this branch. They’ve an Edge Hill friend and graduate, Mark Champion, working there and also a current student on a work placement. The team over at the Wigan office, as well as Heather and I, were to help Elizabeth Sullivan on this test run. If we could get the kinks ironed out and prove that this method can work, then she hopes the project can be rolled out over a wider area, having people from other areas collected specimens for genetic analysis.

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Setting off for sites such as Wigan Flashes Local Nature Reserve (LNR) and Low Hall LNR to sample Plantago lanceolata (ribwort plantain) and Lotus corniculatus (bird’s-foot trefoil). These areas were teeming with life, plenty of butterflies, damselflies and dragonflies in the air, no doubt a result of the extreme heat we’ve been experiencing for the past few weeks. I managed to get a few good snaps of some butterflies around the area – particularly the common blue. Although I didn’t manage to grab a picture of the dragonflies out that day, I did snap a good one on the first year biology residential field trip to Cyprus.

Since collecting these samples from meadows in the Wigan area, Heather and I have been in the lab, processing samples she and another recent Edge Hill graduate, Katherine Judson, collected a few weeks ago. These samples were of Rhinanthus minor (yellow rattle) and were collected from roadside verges down in Worcestershire. These roadside collections help build up the bigger picture, filling in the gaps of connectivity in meadows as part of Elizabeth’s work.

Currently, Heather and I are extracting DNA from these yellow rattle samples, amplifying them with fluorescently tagged microsatellite markers, sequencing them – ready for fragment analysis. After sequencing, I hope to help Elizabeth with the analysis and present a poster on the findings at the upcoming Annual Biology/Geography Postgraduate Research Forum!

An Internship Closer to Home

It’s been over 12 months since I’ve been properly on campus – with an ERASMUS+ internship in Sweden and a placement year in the USA, it’s weird to be back! However, there’s no rest for the wicked so I’m back on another internship, this time a lot closer to home. The biosciences department offer a number of summer internships aimed at second years who are progressing into third year. Being abroad at the time of application, I participated in a Skype interview – a strange experience! In the end, I was lucky enough to receive a place on Paul Ashton’s internship titled, “Does meadow restoration conserve genetic variation?”

However, I haven’t actually got to that part of the work yet! Before I start on that project (being worked on by a Graduate Teaching Assistant (GTA) and PhD student, Elizabeth Sullivan), I’m assisting on a different project to do with lime trees. This project is Carl Baker’s (a Postdoc Researcher). Recently, I’ve been assisting in the final steps of DNA extraction, cleaning up the extracted DNA and ridding any impurities from the DNA product. One part of this “CTAB extraction” process involves inverting and emptying a tube of liquid whilst keeping a pellet of DNA precariously stuck to the bottom – quite nerve-wracking to see your sample hanging by a thread!

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Another unexpected aspect of this internship was setting up and running a session for the 2018 Edge Hill Biology Olympiad. The Olympiad is a series of challenges completed by teams from various sixth forms and colleges that come to Edge Hill University for the day. Each activity is graded and the scores released in a ceremony at the end of the day. I didn’t expect to be doing this kind of work but thoroughly embraced it – it was a great opportunity to push myself and see what it felt like to run a teaching exercise of sorts.

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I’m looking forward to getting more involved in the research here and hopefully preparing myself for my dissertation on large-leaved lime trees!

More to come, soon!